Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015879455.1_cds_XP_016437174.1_32956
CDS Infomation

[gene=LOC107763220] [db_xref=GeneID:107763220] [protein=30-kDa cleavage and polyadenylation specificity factor 30-like] [protein_id=XP_016437174.1] [location=join(69086..69492,70191..70583,70984..71146,71296..71406,72478..72546,74627..74713,75478..76260)] [gbkey=CDS]
Sequence

ATGGATGATGGAGAAGGAGGATTAAGCTTTGACTTCGAAGGCGCGCTAGACACATTGCCT
ACACACCCAACTGCATCAGTACCAGTAATACAATCCTCAGACCATTACAACACCATCACC
ACTGCGGGACCCGACCCGAGTGCTTCTACTGCCTCAGTCCCTACAGTCGGACTAGGGCAA
GGGCAATTAGGCGATGGTTCATTTGTTGGGAATCGTAGAAGCTTCAGGCAGACTGTTTGC
CGGCATTGGCTGCGGTCGCTGTGTATGAAAGGTGATGCCTGTGGTTTCCTCCACCAATAT
GATAAGTCTCGAATGCCTATTTGCAGGTTTTTTCGACTCTACGGAGAGTGTCGTGAGCCG
GATTGTGTTTATAAGCACACCAATGAGGATATTAAAGAGTGTAACATGTATAAATTGGGA
TTTTGCCCGAATGGTCCTGATTGCCGGTATAGACATGCAAAGCTGCCTGGACCTCCACCT
CCAGTGGAAGAAGTTCTTCAGAAAATTCAGAATTTGACATCCTACAACTATGGTTACTCA
AACCGGTTTTTACAGAACCGCAATGCTAATTATTCAACTCAGGCAGACAAATCTCCTACT
CAGCAAGTACAGAATGTAATGAATCAAGCAGTGAAATCTACAGCTGTAGAGCCACCCATT
GGACCGCAGCACCAGGCACATCAACAGCAAGTTCAACAGCCTCAACATCACAGTGCCCCA
ACTCAAACACAAACTCTTCCTAATGGCCAGCAAAATCAGGCGGATAGAACTGCAATACCC
CTGCCTCAAGGAACATCTAGGTACTTTATAGTTAAAAGCTGCAACCCTGAGAATCTTGAA
TTGTCAGTACAACAAGGAGTTTGGGCAACTCAACGAAGCAATGAAGCTAAACTAAATGAA
GCTTTCGATTCTGTGGAAAATGTCATTCTAGTTTTTTCGATCAACCGGACTAGACATTTT
CAGGGTCTTGCAAAAATGACATCTAGAATTGGTGGTGCTTCTAAAGGAGGAAACTGGAAG
CATGAACATGGAACTGCACATTTTGGACGGAATTTTTCAGTAAAATGGTTAAAGCTCTGT
GAACTGTCCTTCCAGAAAACTCGCCATTTGAGGAATCCATATAATGAAAACTTACCTGTG
AAGATAAGCAGAGATTGTCAAGAACTAGAGATCTCTGTTGGAGAGAAGTTAGCTTCTTTA
CTCTATCTAGAACCAGACAGTGAACTTATGGCAATCTCACTTGCAGCAGAATCCAAGCGA
GAGGAGGAAAGAGCAAAGGGAGTAAACCCTGACAATGGGAATGAGAACCCAGATATTGTA
CCTTTTGAAGACAATGAAGAAGAGGAAGAGGAAGAAAGTGAGGAGGAGGATGAGAGCTTT
GGTCAAGCTTTTGGACCAGCTGCTTTTGACAGAGGAAGTGGTAGGGGAATTGTATGGCCT
CCTATAGTTCCTTTTGGACGTGGAGCCAGGCCTTATCCTGGGATGCGGGGCTTCCCTCCA
CGCATGATGAGTGATGGGTTTTCTTATGGATCAATGACACCTGATGGTTTTCCTATGTCG
GATCTTTTTGGAATGGGCGGCCGACCTTTTGGACCATTTGGCCCTCGATTCCCAGGTGAT
ATGATGTTTCACAACCGTCCTCCAGCTGCCGGTGGATTTGGGATGATGATGGGTCCAGGA
ACGGCCCCTTTCATGGGTGGAATGGGTCCTGGAGCAACTGGCCCACCCAGAGGTGGTCGG
CCAATGGGAATGCATCCATCATTTATTCCACCCCCATCACAACCTTCTCAAAATCCTAGG
GTCAAAAGGGATCCGAAAGATCCACTTAATGAAAGGATTGATAGATTCAGTTCAGGTTCA
GATCAACGTAGGGGTCAAGAGATGGCAGGCTCAGTTGGTGGACCAGATGAAGGAGTAAGT
TATCCACAAACTGGAAACAGCTTTAGAAATGATGAAAGCGAAAGCGAGGATGAAGCACCT
AGAAGGTCCAGACATGGGGATGGAAAGAAATAG

Peptide Sequence

PEP ID

XP_016437174.1
PEP Infomation

PREDICTED: 30-kDa cleavage and polyadenylation specificity factor 30-like [Nicotiana tabacum]
Sequence

MDDGEGGLSFDFEGALDTLPTHPTASVPVIQSSDHYNTITTAGPDPSASTASVPTVGLGQ
GQLGDGSFVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREP
DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQNLTSYNYGYS
NRFLQNRNANYSTQADKSPTQQVQNVMNQAVKSTAVEPPIGPQHQAHQQQVQQPQHHSAP
TQTQTLPNGQQNQADRTAIPLPQGTSRYFIVKSCNPENLELSVQQGVWATQRSNEAKLNE
AFDSVENVILVFSINRTRHFQGLAKMTSRIGGASKGGNWKHEHGTAHFGRNFSVKWLKLC
ELSFQKTRHLRNPYNENLPVKISRDCQELEISVGEKLASLLYLEPDSELMAISLAAESKR
EEERAKGVNPDNGNENPDIVPFEDNEEEEEEESEEEDESFGQAFGPAAFDRGSGRGIVWP
PIVPFGRGARPYPGMRGFPPRMMSDGFSYGSMTPDGFPMSDLFGMGGRPFGPFGPRFPGD
MMFHNRPPAAGGFGMMMGPGTAPFMGGMGPGATGPPRGGRPMGMHPSFIPPPSQPSQNPR
VKRDPKDPLNERIDRFSSGSDQRRGQEMAGSVGGPDEGVSYPQTGNSFRNDESESEDEAP
RRSRHGDGKK

Transcript Sequence

Gene sequence data has not been registered.